FS#61775 - [python-rpy2] Missing optional dependency

Attached to Project: Community Packages
Opened by Phil Schaf (flying-sheep) - Friday, 15 February 2019, 13:23 GMT
Last edited by Antonio Rojas (arojas) - Friday, 15 February 2019, 15:59 GMT
Task Type Bug Report
Category Packages
Status Closed
Assigned To Antonio Rojas (arojas)
Architecture All
Severity Low
Priority Normal
Reported Version
Due in Version Undecided
Due Date Undecided
Percent Complete 100%
Votes 0
Private No

Details

Needs python-tzlocal for pandas conversions:

---------------------------------------------------------------------------
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-2-81b931a5ec0b> in <module>
4 from anndata import AnnData
5
----> 6 from rpy2.robjects import pandas2ri
7
8

/usr/lib/python3.7/site-packages/rpy2/robjects/pandas2ri.py in <module>
21 import numpy
22 import pytz
---> 23 import tzlocal
24 import warnings
25

ModuleNotFoundError: No module named 'tzlocal'
This task depends upon

Closed by  Antonio Rojas (arojas)
Friday, 15 February 2019, 15:59 GMT
Reason for closing:  Fixed
Additional comments about closing:  in svn

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