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Do NOT report bugs when a package is just outdated, or it is in the AUR. Use the 'flag out of date' link on the package page, or the Mailing List.
REPEAT: Do NOT report bugs for outdated packages!
https://wiki.archlinux.org/title/Bug_reporting_guidelines
Do NOT report bugs when a package is just outdated, or it is in the AUR. Use the 'flag out of date' link on the package page, or the Mailing List.
REPEAT: Do NOT report bugs for outdated packages!
FS#58789 - [python-pytables] Abort with hdf5 library version mismatch
Attached to Project:
Community Packages
Opened by Ian Liu (ianliu) - Wednesday, 30 May 2018, 02:02 GMT
Last edited by Bruno Pagani (ArchangeGabriel) - Saturday, 02 June 2018, 13:27 GMT
Opened by Ian Liu (ianliu) - Wednesday, 30 May 2018, 02:02 GMT
Last edited by Bruno Pagani (ArchangeGabriel) - Saturday, 02 June 2018, 13:27 GMT
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DetailsDescription:
On an updated Arch Linux, running the following python script will core dump: import tables tables.open_file('foo.h5') Here is the error message: https://ptpb.pw/jsrI WORKAROUND: Downgrading the hdf5 package to 1.10.1-3 works. Additional info: ~$ pacman -Syu && date :: Synchronizing package databases... core is up to date extra is up to date community is up to date multilib is up to date :: Starting full system upgrade... there is nothing to do Tue May 29 22:55:20 -03 2018 ~$ pacman -Si python-pytables Repository : community Name : python-pytables Version : 3.4.3-1 Description : A package for managing hierarchical datasets and designed to efficiently and easily cope with extremely large amounts of data Architecture : x86_64 URL : http://www.pytables.org Licenses : BSD Groups : None Provides : None Depends On : lzo hdf5 python-numexpr blosc Optional Deps : None Conflicts With : None Replaces : None Download Size : 1184.21 KiB Installed Size : 9167.00 KiB Packager : Andrzej Giniewicz <gginiu@gmail.com> Build Date : Thu 10 May 2018 07:50:02 AM -03 Validated By : MD5 Sum SHA-256 Sum Signature ~$ pacman -Si hdf5 Repository : community Name : hdf5 Version : 1.10.2-3 Description : General purpose library and file format for storing scientific data Architecture : x86_64 URL : https://www.hdfgroup.org/hdf5/ Licenses : custom Groups : None Provides : hdf5-cpp-fortran Depends On : zlib libaec bash Optional Deps : None Conflicts With : None Replaces : hdf5-cpp-fortran Download Size : 2.87 MiB Installed Size : 9.72 MiB Packager : Bruno Pagani <archange@archlinux.org> Build Date : Wed 23 May 2018 10:47:51 AM -03 Validated By : MD5 Sum SHA-256 Sum Signature |
This task depends upon
Closed by Bruno Pagani (ArchangeGabriel)
Saturday, 02 June 2018, 13:27 GMT
Reason for closing: Fixed
Additional comments about closing: python-pytables 3.4.3-2
Saturday, 02 June 2018, 13:27 GMT
Reason for closing: Fixed
Additional comments about closing: python-pytables 3.4.3-2
Comment by Bruno Pagani (ArchangeGabriel) -
Saturday, 02 June 2018, 08:23 GMT
Rebuild on the way.