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REPEAT: Do NOT report bugs for outdated packages!
https://wiki.archlinux.org/title/Bug_reporting_guidelines
Do NOT report bugs when a package is just outdated, or it is in the AUR. Use the 'flag out of date' link on the package page, or the Mailing List.
REPEAT: Do NOT report bugs for outdated packages!
FS#28334 - [paraview] hdf5 inconsistency
Attached to Project:
Community Packages
Opened by Simone (junki.gnu) - Thursday, 09 February 2012, 14:30 GMT
Last edited by Thomas Dziedzic (tomd123) - Thursday, 09 February 2012, 18:12 GMT
Opened by Simone (junki.gnu) - Thursday, 09 February 2012, 14:30 GMT
Last edited by Thomas Dziedzic (tomd123) - Thursday, 09 February 2012, 18:12 GMT
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DetailsDescription:
Paraview 3.12.0 is compiled against hdf5 1.8.7, but now in the repo there is the 1.8.8 version. So the the headers mismatch and Paraview rises the following error: --------- The HDF5 header files used to compile this application do not match the version used by the HDF5 library to which this application is linked. Data corruption or segmentation faults may occur if the application continues. This can happen when an application was compiled by one version of HDF5 but linked with a different version of static or shared HDF5 library. You should recompile the application or check your shared library related settings such as 'LD_LIBRARY_PATH'. You can, at your own risk, disable this warning by setting the environment variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'. Setting it to 2 or higher will suppress the warning messages totally. Headers are 1.8.7, library is 1.8.8 --------- Steps to reproduce: Open an h5 file and try to render it. Fix: Simply recompile Paraview. |
This task depends upon
Closed by Thomas Dziedzic (tomd123)
Thursday, 09 February 2012, 18:12 GMT
Reason for closing: Fixed
Additional comments about closing: pkgrel -4
Thursday, 09 February 2012, 18:12 GMT
Reason for closing: Fixed
Additional comments about closing: pkgrel -4
There is a build failure currently which fails to build paraview against zlib 1.2.6 (latest) because of a change in the gzFile typedef.
I will try to patch this and get it to build.
Then I will file a bug report at paraview upstream.
About zlib, it's new to me, but a possible workaround is to avoid system zlib,
so Paraview build it's own.
with patch attached