--- old/protege	2008-09-11 11:36:27.242805673 +0200
+++ new/protege	2008-09-11 11:35:55.059041472 +0200
@@ -5,4 +5,4 @@
 done
 CP=$CP:plugins/edu.stanford.smi.protegex.changes/change-model.jar
 export PROTEGE_HOME=/usr/share/java/protege
-exec java -cp $CP edu.stanford.smi.protege.Application
+exec java -Dprotege.properties.in.user.home=true -cp $CP edu.stanford.smi.protege.Application